Evolution and phylogenetics profiles

All profiles in the Evolution and phylogenetics domain, version 0.1.0-alpha.5. The Review column shows each profile’s review status. In this release every profile is candidate or draft, and none has been scientifically reviewed yet. A profile describes whether two ports fit together; it does not establish scientific validity or clinical safety.

Profile	Name	Stage	Review	Required items
Adaptation Score	adaptation-score	WAVE_2	candidate	7
Allele Frequency Trajectory	allele-frequency-trajectory	WAVE_2	candidate	6
Ancestral Sequence	ancestral-sequence	WAVE_2	candidate	6
Ancestral State	ancestral-state	WAVE_2	candidate	4
Coalescent Tree	coalescent-tree	WAVE_2	candidate	4
Divergence Time	divergence-time	WAVE_2	candidate	7
Effective Population Size	effective-population-size	WAVE_2	candidate	4
Evolutionary Distance	evolutionary-distance	WAVE_2	candidate	7
Evolutionary Simulation State	evolutionary-simulation-state	WAVE_2	candidate	4
Extinction Event	extinction-event	WAVE_2	candidate	4
Fitness Landscape	fitness-landscape	WAVE_2	candidate	4
Fitness Value	fitness-value	WAVE_2	candidate	7
Gene Family	gene-family	WAVE_2	candidate	6
Horizontal Transfer Event	horizontal-transfer-event	WAVE_2	candidate	4
Linkage Disequilibrium	linkage-disequilibrium	WAVE_2	candidate	4
Mutation Rate	mutation-rate	WAVE_2	candidate	7
Orthology Relation	orthology-relation	WAVE_2	candidate	4
Paralogy Relation	paralogy-relation	WAVE_2	candidate	4
Phylogenetic Network	phylogenetic-network	WAVE_2	candidate	6
Phylogenetic Tree	phylogenetic-tree	WAVE_2	candidate	6
Population Genetic Statistic	population-genetic-statistic	WAVE_2	candidate	6
Recombination Rate	recombination-rate	WAVE_2	candidate	7
Selection Coefficient	selection-coefficient	WAVE_2	candidate	4
Speciation Event	speciation-event	WAVE_2	candidate	4
Substitution Model	substitution-model	WAVE_2	candidate	4

Each profile links to its JSON definition. See the catalogue for search, filters and what the Stage and Review columns mean.