<!-- Source: https://docs.biosimulant.com/standards/model-compatibility/catalogue-domains/proteome -->

# Proteome and protein structure profiles

All profiles in the Proteome and protein structure domain, version 0.1.0-alpha.5. The Review column shows each profile's review status. In this release every profile is candidate or draft, and none has been scientifically reviewed yet. A profile describes whether two ports fit together; it does not establish scientific validity or clinical safety.

| Profile | Name | Stage | Review | Required items |
|---|---|---:|---:|---:|
| <span id="active-site"></span>[Active Site](/standards/model-compatibility/profiles/proteome/active-site/v0.1.json) | `active-site` | WAVE_2 | candidate | 4 |
| <span id="antibody-binding"></span>[Antibody Binding](/standards/model-compatibility/profiles/proteome/antibody-binding/v0.1.json) | `antibody-binding` | WAVE_2 | candidate | 4 |
| <span id="binding-site"></span>[Binding Site](/standards/model-compatibility/profiles/proteome/binding-site/v0.1.json) | `binding-site` | WAVE_2 | candidate | 4 |
| <span id="enzyme-activity"></span>[Enzyme Activity](/standards/model-compatibility/profiles/proteome/enzyme-activity/v0.1.json) | `enzyme-activity` | WAVE_2 | candidate | 4 |
| <span id="peptide-abundance"></span>[Peptide Abundance](/standards/model-compatibility/profiles/proteome/peptide-abundance/v0.1.json) | `peptide-abundance` | WAVE_2 | candidate | 7 |
| <span id="phosphoprotein-abundance"></span>[Phosphoprotein Abundance](/standards/model-compatibility/profiles/proteome/phosphoprotein-abundance/v0.1.json) | `phosphoprotein-abundance` | WAVE_2 | candidate | 9 |
| <span id="phosphorylation-site-state"></span>[Phosphorylation Site State](/standards/model-compatibility/profiles/proteome/phosphorylation-site-state/v0.1.json) | `phosphorylation-site-state` | WAVE_2 | candidate | 4 |
| <span id="post-translational-modification"></span>[Post-translational Modification](/standards/model-compatibility/profiles/proteome/post-translational-modification/v0.1.json) | `post-translational-modification` | WAVE_2 | candidate | 4 |
| <span id="protein-abundance"></span>[Protein Abundance](/standards/model-compatibility/profiles/proteome/protein-abundance/v0.1.json) | `protein-abundance` | WAVE_2 | candidate | 9 |
| <span id="protein-complex"></span>[Protein Complex](/standards/model-compatibility/profiles/proteome/protein-complex/v0.1.json) | `protein-complex` | WAVE_2 | candidate | 6 |
| <span id="protein-domain"></span>[Protein Domain](/standards/model-compatibility/profiles/proteome/protein-domain/v0.1.json) | `protein-domain` | WAVE_2 | candidate | 6 |
| <span id="protein-expression-matrix"></span>[Protein Expression Matrix](/standards/model-compatibility/profiles/proteome/protein-expression-matrix/v0.1.json) | `protein-expression-matrix` | WAVE_2 | candidate | 8 |
| <span id="protein-fold-change"></span>[Protein Fold Change](/standards/model-compatibility/profiles/proteome/protein-fold-change/v0.1.json) | `protein-fold-change` | WAVE_2 | candidate | 6 |
| <span id="protein-identity"></span>[Protein Identity](/standards/model-compatibility/profiles/proteome/protein-identity/v0.1.json) | `protein-identity` | WAVE_2 | candidate | 6 |
| <span id="protein-interaction-edge"></span>[Protein Interaction Edge](/standards/model-compatibility/profiles/proteome/protein-interaction-edge/v0.1.json) | `protein-interaction-edge` | WAVE_2 | candidate | 6 |
| <span id="protein-interaction-network"></span>[Protein Interaction Network](/standards/model-compatibility/profiles/proteome/protein-interaction-network/v0.1.json) | `protein-interaction-network` | WAVE_2 | candidate | 6 |
| <span id="protein-localization"></span>[Protein Localization](/standards/model-compatibility/profiles/proteome/protein-localization/v0.1.json) | `protein-localization` | WAVE_2 | candidate | 6 |
| <span id="protein-sequence"></span>[Protein Sequence](/standards/model-compatibility/profiles/proteome/protein-sequence/v0.1.json) | `protein-sequence` | WAVE_2 | candidate | 6 |
| <span id="protein-stability"></span>[Protein Stability](/standards/model-compatibility/profiles/proteome/protein-stability/v0.1.json) | `protein-stability` | WAVE_2 | candidate | 6 |
| <span id="protein-structure"></span>[Protein Structure](/standards/model-compatibility/profiles/proteome/protein-structure/v0.1.json) | `protein-structure` | WAVE_2 | candidate | 6 |
| <span id="protein-turnover"></span>[Protein Turnover](/standards/model-compatibility/profiles/proteome/protein-turnover/v0.1.json) | `protein-turnover` | WAVE_2 | candidate | 6 |
| <span id="proteoform"></span>[Proteoform](/standards/model-compatibility/profiles/proteome/proteoform/v0.1.json) | `proteoform` | WAVE_2 | candidate | 4 |
| <span id="residue-coordinate"></span>[Residue Coordinate](/standards/model-compatibility/profiles/proteome/residue-coordinate/v0.1.json) | `residue-coordinate` | WAVE_2 | candidate | 4 |
| <span id="secondary-structure"></span>[Secondary Structure](/standards/model-compatibility/profiles/proteome/secondary-structure/v0.1.json) | `secondary-structure` | WAVE_2 | candidate | 4 |
| <span id="secretion-rate"></span>[Secretion Rate](/standards/model-compatibility/profiles/proteome/secretion-rate/v0.1.json) | `secretion-rate` | WAVE_2 | candidate | 7 |

Each profile links to its JSON definition. See the [catalogue](/standards/model-compatibility/catalogue) for search, filters and what the Stage and Review columns mean.
